PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP010697.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 239aa    MW: 25551.2 Da    PI: 7.5454
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP010697.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.69.6e-13167212655
                  HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +++Er RR +i +++ +L+el+P+     +k  + a++L +AveY+k Lq
  PCP010697.1 167 SIAERVRRTKISDRIRKLQELVPNM----DKQTNTADMLDEAVEYVKFLQ 212
                  689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MQRAAGGSSG GEVSQGGGGL GRYSSAPATW LEALLEEDEE DPLKPTQCLT ELLAGNTPCT  60
TVDPASYDGA AGYLSRQKSS PADFNGSGGE SGGYFAGFGI PAHLDFVSSS SSLSPNSPSS  120
SANKRVREQQ QHHFSSDTHV KVEEGGLEDS VGCRVRAKRG CATHPRSIAE RVRRTKISDR  180
IRKLQELVPN MDKQTNTADM LDEAVEYVKF LQKQIQGSYV IKNSKHGRNF RSISAGANA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G35460.13e-50bHLH family protein