PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP010729.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

DBB

Protein Properties

Length: 240aa MW: 25895.8 Da PI: 6.4774

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP010729.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	20.6	9.4e-07	4	47	5	42
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 C+ +e e++ C ++ lC C +++H H++vpl PCP010729.1 4 LCNACEVAEAKVLCCADEAALCWACDQKIHAAnklaskHQRVPL 47 7****99*******************66899999999986 PP
2	zf-B_box	28.7	2.8e-09	53	86	2	35
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHk 35 ++kC+ ++e +fC +++ llC++C +++H PCP010729.1 53 PMPKCDICQEMVGYFFCLQDRALLCRKCDVAIHT 86 689******9******************93 PP

Sequence ? help Back to Top
Protein Sequence Length: 240 aa Download sequence
MKILCNACEV AEAKVLCCAD EAALCWACDQ KIHAANKLAS KHQRVPLSSS SSPMPKCDIC 60 QEMVGYFFCL QDRALLCRKC DVAIHTVNSY VSSHQRFVLT GVKVGLEATK PCISTSTKEM 120 LTSVETVSES ASSRPINKSP VGPFVGEIKQ ALPGKVDSVG TGVSGKLPLI QNANTSGSGS 180 NLEEFLGFTD PNQNFGVLDR MSPKLLEDDS GLNQISEGRL LEIASCRAVF SLFYFCDQVM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78600.1	2e-67	DBB family protein