PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP010844.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 203aa MW: 23134.4 Da PI: 9.5495

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP010844.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	154.8	3.9e-48	14	138	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kg 97 lppGfrF+Ptdeelv +yL+ kv + +l++ ++i+e++++ ++PwdLp e+e yfFs+r++ky++g+r+nr+t+sgyWkatg dk+++s+ k+ PCP010844.1 14 LPPGFRFQPTDEELVFQYLRCKVFSCPLPA-SIIPEINVCLYDPWDLPGD---LEQERYFFSNRESKYRNGNRANRVTSSGYWKATGVDKKIVSSrKN 107 79**************************.89***********54...46799*******************************98567 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 + vg kktLvfykg++p+ +ktdWvmhey l PCP010844.1 108 NIVGKKKTLVFYKGKSPNVSKTDWVMHEYCL 138 77*************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 203 aa Download sequence
MDKFNFLRNG MTRLPPGFRF QPTDEELVFQ YLRCKVFSCP LPASIIPEIN VCLYDPWDLP 60 GDLEQERYFF SNRESKYRNG NRANRVTSSG YWKATGVDKK IVSSRKNNIV GKKKTLVFYK 120 GKSPNVSKTD WVMHEYCLVN AETTASIHTT ENALTPKGNW VLCRVFLKKR SGKTDEEIMV 180 NYNGIRVCDN ASPVSSSSSC SSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13180.1	5e-81	NAC family protein