PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP010993.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bHLH

Protein Properties

Length: 535aa MW: 59655.4 Da PI: 7.0501

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP010993.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.3	5e-12	360	405	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RRd++N +f Lr ++P+ +++Ka+ L Av YI++L PCP010993.1 360 NHVEAERQRRDKLNRRFYALRAVVPNV-----SRMDKASLLSDAVVYINEL 405 799*********************6.....4*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 535 aa Download sequence
MVLGCGRKWL WVKNGKRRNF SFVAVGAAWL PWLDYCGLHR KEMRDGMGVR ITTTANATAH 60 HIITITYNCN HQPYNNVAVT TTIVTTANNT SIVANVNRPE QWVYSIFWQA SSKDSNDLVS 120 LSWADGHFRS TGDLASKQSY NKANVFDVVE RKNGISREVE ALFYEGMDLD GGDVTDAEWF 180 YFYTASLTQS FTAGHGNILG RTFCSGDFVW LAGDHELQFY ECERVKEARM HGIHTLVCIA 240 TSCGVLELAS LDAIKVDWGL VQMSKSLFGS KNNNMVSKQL SSSREDHVLV PLLESGMFSG 300 AEQIEGTTQG GTKEVDPVTI GGSSSDSVGN FTSENMENIR LKKRGRSSNS ETGRSETPIN 360 HVEAERQRRD KLNRRFYALR AVVPNVSRMD KASLLSDAVV YINELKARVE QLEAKIQAQH 420 LKPVVDIGGQ TTSSIIDHHQ TRPRLSSSYD NKAAGVMEID VKIVGSEAMI RVQCPDCDYP 480 NARLMNALKD LELQVYHASL SSVKEWMLQD VVARVPQGFT SEEALRIAII KGWYN

Sequence ? help Back to Top

Protein Sequence Length: 535 aa Download sequence

MVLGCGRKWL WVKNGKRRNF SFVAVGAAWL PWLDYCGLHR KEMRDGMGVR ITTTANATAH  60
HIITITYNCN HQPYNNVAVT TTIVTTANNT SIVANVNRPE QWVYSIFWQA SSKDSNDLVS  120
LSWADGHFRS TGDLASKQSY NKANVFDVVE RKNGISREVE ALFYEGMDLD GGDVTDAEWF  180
YFYTASLTQS FTAGHGNILG RTFCSGDFVW LAGDHELQFY ECERVKEARM HGIHTLVCIA  240
TSCGVLELAS LDAIKVDWGL VQMSKSLFGS KNNNMVSKQL SSSREDHVLV PLLESGMFSG  300
AEQIEGTTQG GTKEVDPVTI GGSSSDSVGN FTSENMENIR LKKRGRSSNS ETGRSETPIN  360
HVEAERQRRD KLNRRFYALR AVVPNVSRMD KASLLSDAVV YINELKARVE QLEAKIQAQH  420
LKPVVDIGGQ TTSSIIDHHQ TRPRLSSSYD NKAAGVMEID VKIVGSEAMI RVQCPDCDYP  480
NARLMNALKD LELQVYHASL SSVKEWMLQD VVARVPQGFT SEEALRIAII KGWYN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	341	347	LKKRGRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00870.1	1e-62	bHLH family protein