PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP011213.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 232aa MW: 26917.8 Da PI: 8.1891

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP011213.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	62.8	1.1e-19	78	200	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyat.gkrknr.atksgyWkatgkdkevlskk 96 G+ F+P+d lv++yL++k+ + +l + + i+++d+y +P++L k k+ + ++ wyfF++++ ++++ g+ ++ ++ +g W g++ +vl+ + PCP011213.1 78 LGYTFNPEDGLLVCHYLREKCLDGDLLF-HSIEDADVYAKHPQNLIdKyKAVGARNVWYFFTRTRPNETQpGTSTSTeQVLAGKWI-IGNEMDVLH-Q 172 69*********************888.77**********732233346679*998877754555554456698.8999*9.9 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 ge+vg+k+ L + +g+a kt+ + ey+l PCP011213.1 173 GEKVGVKQLLEYCDGDA----KTQYKIIEYKL 200 99*********8776....56777777765 PP

Sequence ? help Back to Top
Protein Sequence Length: 232 aa Download sequence
MVQRKSSRLQ SVKEQEKLET DPIELRKKQL ILDIREAGRI GDQNEQKRRI RWIRETEMMN 60 KLSKARKIRD LQVQLISLGY TFNPEDGLLV CHYLREKCLD GDLLFHSIED ADVYAKHPQN 120 LIDKYKAVGA RNVWYFFTRT RPNETQPGTS TSTEQVLAGK WIIGNEMDVL HQGEKVGVKQ 180 LLEYCDGDAK TQYKIIEYKL DPLPDNLKSG PWFVCKLYND ASCVEVQSLI NG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G07680.2	1e-11	NAC family protein