PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP011299.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family B3
Protein Properties Length: 161aa    MW: 18448.5 Da    PI: 8.8799
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP011299.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B344.33.1e-1475138159
                  EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEE CS
           B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgry 59 
                  f+kv  psdv++++r+v+pk++ae+h       g+   +++ l++ede g++W++ ++y+ +s+r+
  PCP011299.1  75 FEKVAPPSDVGRLNRMVIPKQHAEKHfqvhlsvGLG--KGMLLKFEDEVGKVWRFGYCYWSSSQRM 138
                  899999********************9998877555..789**********************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    
MTPYERDVTE ALFLESHSKA EIVDMLRKHS YANELEMYKH KLYNGGALGL DAGGKRMKCH  60
LDLMDTCSSE RELLFEKVAP PSDVGRLNRM VIPKQHAEKH FQVHLSVGLG KGMLLKFEDE  120
VGKVWRFGYC YWSSSQRMRW VKCGGLGIVI GVVVRVMYTL H
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68840.21e-42RAV family protein