PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP011404.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

WOX

Protein Properties

Length: 235aa MW: 26010.8 Da PI: 8.5213

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP011404.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	48.1	2e-15	28	88	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+ ++++q+ +Le+ F++ +p +ee ++ k l ++ +++V++WFqNrR + ++ PCP011404.1 28 RSRWIPKPQQILILESIFNSgMVNPPKEETVRIRKLLekfgSVGDANVFYWFQNRRSRSRR 88 89***************99***********************************997 PP
2	Wus_type_Homeobox	103.7	1.2e-33	27	90	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +r+RW P+p+Qi iLe++++sG+++P+kee+ ri++ Le++G ++d+NVfyWFQNr++R+r++q PCP011404.1 27 VRSRWIPKPQQILILESIFNSGMVNPPKEETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQ 90 589***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 235 aa Download sequence
MEDHHQGQDP NDSSPTNGST ERSPEPVRSR WIPKPQQILI LESIFNSGMV NPPKEETVRI 60 RKLLEKFGSV GDANVFYWFQ NRRSRSRRRQ RQLQASLEQR TNNNINNNQM ASLSQHQVGG 120 AIQYGESCGV PTAAPPLAFG ASPNNFLVGS SSSSCGQHLI ADHDVHHSID CVGDQFFSVS 180 GQMGFPEIEQ SSGVTSVLGG GPSDTSNLHF QSVFSTRFQI TLKKTLQRNS VNLFR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G03660.1	7e-34	WOX family protein