PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP011466.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 279aa    MW: 30540 Da    PI: 4.9305
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP011466.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.83.1e-194089255
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 ++ GVr+++ +gr++AeIrdps+   + r++lg+f+taeeAa a+++a+++++g
  PCP011466.1 40 RFLGVRRRP-WGRYAAEIRDPST---KERHWLGTFDTAEEAALAYDRAARSMRG 89
                 678******.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MDFFTASPSK SNNSPSSSSK TKRKQQQQQT QQPQTQQETR FLGVRRRPWG RYAAEIRDPS  60
TKERHWLGTF DTAEEAALAY DRAARSMRGS KARTNFVYSD MPHGSSVTSI ISPDESQRDM  120
SAFFTTPLPE THSQSQTHTQ QPFFTHQDPF DAYTVSGGSS TEFGSGSYGP TPGVVADESG  180
YQSQSHTHEL PPLPPCVSSS TCYGPEGIMS SDGVWNESGF YGFSEPTTNN GLDSMVSGSY  240
VGFDSNEYVQ HSPLFGSMPP VPDAGIDGFD LGSSSAYFY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28160.13e-38ERF family protein