PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP011520.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

AP2

Protein Properties

Length: 555aa MW: 61814.5 Da PI: 7.171

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP011520.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	41.2	4e-13	216	272	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n+ ++k+ g ++ +e Aa+a++ a++k++g PCP011520.1 216 SIYRGVTRHRWTGRYEAHLWDkSTWNQnQNKKGKQGAYDDEEAAARAYDLAALKYWG 272 57*****************6666777775555599****************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 555 aa Download sequence
MEFQRSSFSF RSSDYWVHVT LQGFQSPADS KSQFVGELSL RQDQIFQKRF HAFILDEFPL 60 GPDRYATLRF GPRQLLLPEL RAHLRSLSSS LNLDPAIYEA LAPRIKSMAR KLANPNGSMG 120 FVMVATVEIL TIEYVDQLFD DMSNSMALLS IGSSDGGSTS SSISLDFVVE KLGAERYFER 180 GDGDLGSCSV CLEELSGGTA KRISKMPPCA AGKRSSIYRG VTRHRWTGRY EAHLWDKSTW 240 NQNQNKKGKQ GAYDDEEAAA RAYDLAALKY WGPGTLINFP VTDYTRDLEE MQNLSREEYL 300 ASLRRKSSGF SRGLSKYRGL SSRWEPSLGR MGGSEYFNSL HYGTGVDPAT ESELLGAFCT 360 ERKIDLTSYI KWWGPNRSRQ AETSMKSSEE TKHGCVGDIG AELKTLEWEI QPTEPYQMPC 420 LGISHVSKKH KGTRVSAMSI LSRSAAYKNL QEKASQKEEK DADNDENENK NTIHKMDHGK 480 AVEKSTSHDE GLRSALGMSG PSHQRDVFPL APFLSAPLLT SYSAIDPLVD PILWTSLAPV 540 LPSGISRPTE VGTTL

Sequence ? help Back to Top

Protein Sequence Length: 555 aa Download sequence

MEFQRSSFSF RSSDYWVHVT LQGFQSPADS KSQFVGELSL RQDQIFQKRF HAFILDEFPL  60
GPDRYATLRF GPRQLLLPEL RAHLRSLSSS LNLDPAIYEA LAPRIKSMAR KLANPNGSMG  120
FVMVATVEIL TIEYVDQLFD DMSNSMALLS IGSSDGGSTS SSISLDFVVE KLGAERYFER  180
GDGDLGSCSV CLEELSGGTA KRISKMPPCA AGKRSSIYRG VTRHRWTGRY EAHLWDKSTW  240
NQNQNKKGKQ GAYDDEEAAA RAYDLAALKY WGPGTLINFP VTDYTRDLEE MQNLSREEYL  300
ASLRRKSSGF SRGLSKYRGL SSRWEPSLGR MGGSEYFNSL HYGTGVDPAT ESELLGAFCT  360
ERKIDLTSYI KWWGPNRSRQ AETSMKSSEE TKHGCVGDIG AELKTLEWEI QPTEPYQMPC  420
LGISHVSKKH KGTRVSAMSI LSRSAAYKNL QEKASQKEEK DADNDENENK NTIHKMDHGK  480
AVEKSTSHDE GLRSALGMSG PSHQRDVFPL APFLSAPLLT SYSAIDPLVD PILWTSLAPV  540
LPSGISRPTE VGTTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41710.1	1e-120	AP2 family protein