PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP011560.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 298aa    MW: 32047.2 Da    PI: 4.734
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP011560.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH21.15.6e-0728592055
                 HHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH 20 feeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                 f+ Lr+++P++    ++K +Ka+ L +++eY++ Lq
  PCP011560.1 28 FQMLRDIIPQN----DQKRDKASLLLEVIEYVQFLQ 59
                 899*******9....9*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MAKASTGNHD EFEDDDEVSH GGLSLPLFQM LRDIIPQNDQ KRDKASLLLE VIEYVQFLQE  60
RVNLYEGSYQ GWSPEPTKLV PWKNHNRSGE NLADQSQVMN NGSGHENNVV VSPAMLPNAQ  120
NSVESDLGST VVYKALDHIA GLATQSVPNV QQQSIFDSVG SGVPTQPLQE SITDVRNMAS  180
QPQFPSLAGI TSSTVSDGKL NKQDEHSGSG SISSAYSQGV LNNLTQALQS AGLDLSLASI  240
SVQMDVANRA DSGLTSVASS SKAHANRSMN NQMMTQAQVS SCDGGFEPAH KRFRTRDG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.12e-42bHLH family protein