PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP011680.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

MYB

Protein Properties

Length: 251aa MW: 27439.5 Da PI: 6.0404

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP011680.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.2	9.3e-19	14	59	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W+++Ed l+++v+q+G+++W++I+ ++ gR++k+c++rw + PCP011680.1 14 KGSWSPQEDATLIKLVAQHGPRNWSLISTGIP-GRSGKSCRLRWCNQ 59 799***************************.*********985 PP
2	Myb_DNA-binding	55.4	1.4e-17	67	110	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++++++Ed +++a++++G++ W+tIar ++ gRt++ +k++w++ PCP011680.1 67 KPFSPQEDSVIIQAHALHGNK-WATIARLLP-GRTDNAIKNHWNST 110 689****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 251 aa Download sequence
MAMMGAMSGE DRVKGSWSPQ EDATLIKLVA QHGPRNWSLI STGIPGRSGK SCRLRWCNQL 60 SPTVQHKPFS PQEDSVIIQA HALHGNKWAT IARLLPGRTD NAIKNHWNST LRRGRQRAEL 120 SSTSSGSDSA AAVGDEPDMK QQCLRASPVH ESLKANAGGE GVTVETSLTL SPPGEKAENE 180 VVLKSEEEEH GHEAVDNNDD VENCRVETEE TCLLTIMQRM IAREVRNYID SLRENGGPTF 240 GLQSAAHQND P

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G67300.1	2e-53	MYB family protein