PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP011681.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 361aa    MW: 39471.2 Da    PI: 6.454
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP011681.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.41.5e-1764113255
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  +y+GVr+++ +g+WvAeIr+p++   r+r +lg+f tae+Aa a+++a+  l+g
  PCP011681.1  64 RYRGVRQRS-WGKWVAEIREPRK---RTRKWLGTFATAEDAAHAYDRAAIILYG 113
                  59****999.**********954...5**********************98876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    
MEEDQHRDSA AEAAPDHHLP QDNSNSNKTT EDNSTTASTA TTEITNNNNR KCKGKGGPDN  60
NKFRYRGVRQ RSWGKWVAEI REPRKRTRKW LGTFATAEDA AHAYDRAAII LYGSRAQLNL  120
QPSGSSSQNS TRGSSSSASS STSSTQTLRP LLPRPSGFGL TLPYPSSAHP VPLMDSGFVP  180
YGVGLGLGVY HNVAAAAAAV AGCGATSSVR MNQHPHHMLD QDHEYQNNIN PLHQQQQQHQ  240
QQQIVVQQFH HQYPIALSDG SGCDTSTSYL HPNPSHDQYQ RQVPHQNNNN QECCSYEDVN  300
SLVGSGLSTP MEVAPGCSDI PMGTVGPMSP LMWPLTSEEE CVPGLWDYGD PFFLDFKGLD  360
S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40220.13e-22ERF family protein