PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP011727.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

MYB_related

Protein Properties

Length: 228aa MW: 25638.8 Da PI: 10.3323

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP011727.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54	4e-17	98	143	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++ ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l PCP011727.1 98 RGNFGEDEEDLIIKLHALLGNR-WSLIAGRLP-GRTDNEVKNYWNTHL 143 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 228 aa Download sequence
MKRRKTRSAV CAAVSALADG VEKGKPGVGS GHHRRLWVKN RSKAWWDECN QPDFPESEFK 60 KGFGMGKSTF DLICEELNSP SRRRTRRCGT RFRPNLKRGN FGEDEEDLII KLHALLGNRW 120 SLIAGRLPGR TDNEVKNYWN THLRRKLIQM GVDPNNHRIG RTRNIDLSKS SFGSRKVNHP 180 CKAANSQGDN DSDDHQKPFT DSASGPESNT SCSDLPDLNL DLTIGLPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38620.1	2e-35	MYB family protein