PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP011848.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 378aa MW: 42011.3 Da PI: 7.9582

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP011848.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	172.2	1.6e-53	15	142	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kg 97 lppGfrFhPtdeelvv+yLkkk+++ +l++ +i+evd+yk++Pw+Lp+k++ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk+vls+ ++ PCP011848.1 15 LPPGFRFHPTDEELVVHYLKKKAASIPLPV-AIIAEVDLYKFDPWELPSKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLSSvGN 111 79**************************.88***********8888999**********************************99899 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 ++vg+kk Lvfy g+ pkg+kt+W+mheyrl PCP011848.1 112 HKVGVKKALVFYGGKPPKGTKTNWIMHEYRL 142 99*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence
MESTNSSSVL QHPQLPPGFR FHPTDEELVV HYLKKKAASI PLPVAIIAEV DLYKFDPWEL 60 PSKATFGEQE WYFFSPRDRK YPNGARPNRA ATSGYWKATG TDKPVLSSVG NHKVGVKKAL 120 VFYGGKPPKG TKTNWIMHEY RLVNNTTTTI NMSCSTTKPP DPANKKPSLR LDDWVLCRIY 180 KKNKGPVMSL DGDHFLHKAE DSNSSMEDMF LHPSILPTQK TPPLPPPPSS KLPTTDYTAL 240 LESDNHESYL EGILSSSDHQ PGSHSHHHHH DHDHDQFGAI STSISKSSLP LKRHLPSPFW 300 NDVGSIGTAA ATTTSSRKKF HADLINENNS FVSMLNQTPQ GTAPFHANAA LLELLGDGGS 360 APTVSTPKHE LEFLVWFW

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence

MESTNSSSVL QHPQLPPGFR FHPTDEELVV HYLKKKAASI PLPVAIIAEV DLYKFDPWEL  60
PSKATFGEQE WYFFSPRDRK YPNGARPNRA ATSGYWKATG TDKPVLSSVG NHKVGVKKAL  120
VFYGGKPPKG TKTNWIMHEY RLVNNTTTTI NMSCSTTKPP DPANKKPSLR LDDWVLCRIY  180
KKNKGPVMSL DGDHFLHKAE DSNSSMEDMF LHPSILPTQK TPPLPPPPSS KLPTTDYTAL  240
LESDNHESYL EGILSSSDHQ PGSHSHHHHH DHDHDQFGAI STSISKSSLP LKRHLPSPFW  300
NDVGSIGTAA ATTTSSRKKF HADLINENNS FVSMLNQTPQ GTAPFHANAA LLELLGDGGS  360
APTVSTPKHE LEFLVWFW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61110.1	5e-95	NAC family protein