PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP011874.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

ERF

Protein Properties

Length: 444aa MW: 49726.3 Da PI: 6.5197

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP011874.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	60.3	4.5e-19	203	253	2	56
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+GVr+++ +g+WvAeIr p++ r+r +lg+f+tae+Aa a+++ + kl+ge PCP011874.1 203 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEDAAMAYDREAFKLRGE 253 59****9.******955...5************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 444 aa Download sequence
MAAAKKSGKS GMETSVDWEA NKDGDLDFSF ERPPWKPGFS EASMASNRPL KKVKSPERQD 60 PIQSSASLAH QTPSPIIAPY PSSSSKIVFP FFFDGSQQPM MQFPHQFNPT NVPILPSPIQ 120 QQQQQNPQQM ISFESQQLQQ QQQHMSYPPP ATLSWQQHQQ ILQYWSDALN LSPRGRAMMM 180 NRLGPDGRPM FRAPAMPYNT TKLYRGVRQR HWGKWVAEIR LPRNRTRLWL GTFDTAEDAA 240 MAYDREAFKL RGENARLNFP ELFLNKDKPD VPTSSAPSSA ATSPPTHESS KPTRRRKQPQ 300 KVKTSASNME AMPPPPVPHT HEENSTDNDS GLESSEAKAI DEIEANTDCA GGEGNSQQEE 360 IVWGDMAEAW LNAIPAGWGP GSPVWDDLDA NNNLLLQSHL PFTNPNQQDY NTNICPQQVL 420 HNSGSGSSSS SSYPVKNFIW KDQD

Sequence ? help Back to Top

Protein Sequence Length: 444 aa Download sequence

MAAAKKSGKS GMETSVDWEA NKDGDLDFSF ERPPWKPGFS EASMASNRPL KKVKSPERQD  60
PIQSSASLAH QTPSPIIAPY PSSSSKIVFP FFFDGSQQPM MQFPHQFNPT NVPILPSPIQ  120
QQQQQNPQQM ISFESQQLQQ QQQHMSYPPP ATLSWQQHQQ ILQYWSDALN LSPRGRAMMM  180
NRLGPDGRPM FRAPAMPYNT TKLYRGVRQR HWGKWVAEIR LPRNRTRLWL GTFDTAEDAA  240
MAYDREAFKL RGENARLNFP ELFLNKDKPD VPTSSAPSSA ATSPPTHESS KPTRRRKQPQ  300
KVKTSASNME AMPPPPVPHT HEENSTDNDS GLESSEAKAI DEIEANTDCA GGEGNSQQEE  360
IVWGDMAEAW LNAIPAGWGP GSPVWDDLDA NNNLLLQSHL PFTNPNQQDY NTNICPQQVL  420
HNSGSGSSSS SSYPVKNFIW KDQD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	293	298	TRRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20880.1	2e-55	ERF family protein