PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP011908.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 217aa    MW: 24105.5 Da    PI: 4.3846
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP011908.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.7e-191665255
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 +ykGVr +k +g+Wv+eIr p++   r r++lg+++t+e+Aa+a +aa  +l+g
  PCP011908.1 16 KYKGVRKRK-WGKWVSEIRLPNS---RERIWLGSYDTPEKAARAFDAALFCLRG 65
                 8*****999.**********933...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MLNQTSGEPS ERNDVKYKGV RKRKWGKWVS EIRLPNSRER IWLGSYDTPE KAARAFDAAL  60
FCLRGRTAKF NFPDNPPDIP GGRSLSPAEI QVEAARFANS EIPRSHQSMS APQAECQSMS  120
ELQAESQSPS LSEGSGTAFM DTDFQVTPNE SFSDLFGTFG SGNYATEYGL FPGFDEMNGQ  180
FFSPASAAPT PAVDYYAEEN LDGQFFNPAQ ESFLWNF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11824KGVRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.11e-59ERF family protein