PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP011972.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 259aa    MW: 28383.3 Da    PI: 4.6727
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP011972.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2552e-1759110155
          AP2   1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                  + y+GVr++  + +Wv+e r+p   + k+ r++lg++ tae+Aa+a++ a+++++g
  PCP011972.1  59 PVYRGVRRRN-NDKWVCEMREP---NkKKSRIWLGTYPTAEMAARAHDVAALAFRG 110
                  68*****887.8******9998...5477************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MNTITRQLSD SAEKPESSSD TSVTTRSQLT SFSDEEVILA SSTPKKRAGR RVFNETRHPV  60
YRGVRRRNND KWVCEMREPN KKKSRIWLGT YPTAEMAARA HDVAALAFRG RLACLNFADS  120
AWRLPVPAST DSVDIRRAAA EAAETFRPAE FGGVSESGDD EKESKKMEGE KDCGGAEQSD  180
CGGAEQSDCG GAEQSDCGGA EQSGSSFYLD EEEMFAMPRL LDSMAEGLLL SPPRRSAGGN  240
MNWDDMGSND DVNLWSFPK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25480.11e-62ERF family protein