PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP011973.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 185aa    MW: 20341.1 Da    PI: 6.5358
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP011973.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.13.9e-171059155
          AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 ++y+G+r ++  g+Wv+eIr+p++   +kr++lg+f t+e+Aa+a++ a+++l+g
  PCP011973.1 10 PRYRGIR-CR-GGKWVSEIREPRK---TKRIWLGTFPTPEMAAAAYDVAALALKG 59
                 68****9.55.7*********843...5************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    
MASSSSGKHP RYRGIRCRGG KWVSEIREPR KTKRIWLGTF PTPEMAAAAY DVAALALKGT  60
DVALNFPRLI GSYPVPPSTS ALDIRTAATT AAAALQKNSY SMESPKMGQM QKHEVDDMMM  120
SSTSLASSVG YFMDEEELFQ MPNLLVDMAE GMLVSPPRMN DSPPSNYDDS PGNSDGREGR  180
LWSYY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.11e-45ERF family protein