PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP011993.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB_related
Protein Properties Length: 257aa    MW: 28024.3 Da    PI: 9.7587
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP011993.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding35.72e-112321446
                     HHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding 14 davkqlGggtWktIartmgkgRtlkqcksrwqk 46
                     +a++ +G++ W+ Iar ++ gRt++ +k++w+ 
      PCP011993.1  2 QAHRIYGNK-WAMIARLFP-GRTDNALKNHWHV 32
                     79*******.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MQAHRIYGNK WAMIARLFPG RTDNALKNHW HVIMARKYRK QSSACRRKLN QTVYRSVDEN  60
PSVNAASRST KPPPPYGGLS LPNGGLSGGS SISDFPYGTS YYGGVGYYGS NGSQNLISLG  120
EEEAITRKKL ISYNNSGFCS QQQQTPFEFF SGRKSNEVMG MMSQRRCRDG SGEVEDHSCG  180
GTYTHHPPPY MNKMAMQESN FPSLVHQSYS YSSCQVSGGK PSLSASAADR VVGGGGGHRE  240
TSIPPPPFID FLGVGGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69560.13e-24MYB family protein