PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP012100.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family GATA
Protein Properties Length: 245aa    MW: 27545.6 Da    PI: 6.8996
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP012100.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA56.63.5e-18148182135
         GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                  C++C + kTp+WR gp g+ktLCnaCG++y++ +l
  PCP012100.1 148 CTHCASEKTPQWRAGPMGPKTLCNACGVRYKSGRL 182
                  *******************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MEDFFPVDDL LDLSNDALFS PSTASSTNSM DLHHHPPPLD HLHGTTTTSL FAPATTYTDF  60
TNNLCVPSDD VAELEWLSRF IDDSLTDVPA TDLAGSASFQ NEASFMFPSR VRTKLSKWAG  120
PPDPQNSPAR PNRPRREPSE ASPSPLRCTH CASEKTPQWR AGPMGPKTLC NACGVRYKSG  180
RLVPEYRPAA SPTFVLTQHS NSHRKVLELR RQKEASQQQA PQEQPQQHRP HQQQFYLHRD  240
EFRVC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60530.15e-55GATA family protein