PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP012231.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB_related
Protein Properties Length: 273aa    MW: 30273 Da    PI: 6.6803
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP012231.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.76.3e-142670147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     r +WT eE++++++a +++  + Wk+I   +g  +t  q++s+ qky
      PCP012231.1 26 RESWTDEEHDKFLEALQLFDRD-WKKIEDFVG-SKTVIQIRSHAQKY 70
                     789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MGTVSTPSSD GSGKKVRKPY TITKSRESWT DEEHDKFLEA LQLFDRDWKK IEDFVGSKTV  60
IQIRSHAQKY FLKVQKSGTT AHVPPPRPKR KATHPYPQKA SKNGLLPLQA SIAYPSSMNA  120
IASTYSPWDE TSILTNPASD QILLSREEFT NLHGTEADIG SKGLSGINTC SLSGPLPSSE  180
IPNQGKQAPG HHGDHQTANA DYICLPDFAE VYSFIGSVFD PETKGHAQKL REMNPINFET  240
VLLLMRNLSI NLSSPDFEQM SFDLPELDLF SHV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G09600.21e-117MYB_related family protein