PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP012284.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 225aa    MW: 24783.7 Da    PI: 4.9792
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP012284.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.86.6e-1957107155
          AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  + y+GVr++  +g+Wv+e+r+p   +k++r++lg+f tae+Aa+a++ a+ +l+g
  PCP012284.1  57 PVYRGVRRRN-SGKWVCEVREP---NKKTRIWLGTFPTAEMAARAHDVAAIALRG 107
                  68*****888.8******9998...347*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MDAFSHYYVD PQPESSASDS NSARPMFMNL SDEEILLAST YPKKQAGRKK FKETRHPVYR  60
GVRRRNSGKW VCEVREPNKK TRIWLGTFPT AEMAARAHDV AAIALRGRSA CLNFADSAWR  120
LPVPASANAK DIQTAAAEAA EQFRPVEESD EACGASAVAP SECTSASEQQ VHFLDEEAVF  180
GMPGLLANMA EGMLLPPPHY SDDHDVGVYD DVNVYGDVPL WSFSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25470.15e-74ERF family protein