PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP012285.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 235aa    MW: 25024.8 Da    PI: 5.074
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP012285.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.79.1e-1670119155
          AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  + y+G+r ++ +g+Wv+eIr+p++   ++r++lg++  +e+Aa+a++ a+ +l+g
  PCP012285.1  70 PVYRGIR-CR-SGKWVSEIREPRK---TTRIWLGTYPKPEMAAAAYDVAAIALKG 119
                  68****9.55.6*********843...5***********************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MANPYSNVPK TPVDQPTTTS NPNPFIQIPP TPPNPPTSTL PDDSSSSSSP RLGVRSPSGG  60
STSGSPRGHP VYRGIRCRSG KWVSEIREPR KTTRIWLGTY PKPEMAAAAY DVAAIALKGP  120
NTPLNFPNSI LTYPIPASSA ASDIRSAAAR AAQSRANMLV PRERESGGRS EPGGVDNEGV  180
GGVVGQQEEE FMDEEALLNM PNLLVDMAEG MLVSPPRISS DNSPENSNGE NLWNY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.14e-39ERF family protein