PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP012299.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

AP2

Protein Properties

Length: 527aa MW: 58304.9 Da PI: 6.5928

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP012299.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	33.6	9.8e-11	245	301	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + rk + g ++ +++Aa+a++ a++k++g PCP012299.1 245 SIYRGVTRHRWTGRYEAHLWDnSCR-RegqARKGRQ-GGYDKEDKAARAYDLAALKYWG 301 57*****************4444.2344336655.7799999***********98 PP
2	AP2	49.8	8.4e-16	344	395	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++grW A+I + +k +lg+f t+eeAa+a++ a+ k++g PCP012299.1 344 SIYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFATEEEAAEAYDIAAIKFRG 395 57**************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 527 aa Download sequence
MAPASNWLSF SLMSPMEMLR SSESDQSPFV PYDASSTASP HYFLDNFYAS NGWPTNPKSQ 60 VFFADGEDQS KQQGQSGSPN PSPFVDPQSH TQHIPKLEDF LGDSSSMVRY SDSQTETQGS 120 SSMTHIYDQS SAYFGGDQHQ HQHQEDLKAI TGFQAFSTNS GSEVEDSASM ARTTQQQQLA 180 CAEFGSHSIE STGNELGVYN SSCAANALSL GVTTTQSSSD QKKAIVAVDN DGSKKIADTF 240 GQRTSIYRGV TRHRWTGRYE AHLWDNSCRR EGQARKGRQG GYDKEDKAAR AYDLAALKYW 300 GPTATTNFPV STYSKELEDM KHVTKQEFIA SLRRKSSGFS RGASIYRGVT RHHQQGRWQA 360 RIGRVAGNKD LYLGTFATEE EAAEAYDIAA IKFRGINAVT NFEMNRYDVE AIGKSSLPVG 420 GAAKRLKLSL EAEEQKPSVN HDQQHPQCSS GNNINFTAMQ PVHSIPCGIP YDAAAANAYY 480 HNLFHQFQPN YYGALDSAGL NPNIATQMNM MPQQPAEFYI WPNHQSH

Sequence ? help Back to Top

Protein Sequence Length: 527 aa Download sequence

MAPASNWLSF SLMSPMEMLR SSESDQSPFV PYDASSTASP HYFLDNFYAS NGWPTNPKSQ  60
VFFADGEDQS KQQGQSGSPN PSPFVDPQSH TQHIPKLEDF LGDSSSMVRY SDSQTETQGS  120
SSMTHIYDQS SAYFGGDQHQ HQHQEDLKAI TGFQAFSTNS GSEVEDSASM ARTTQQQQLA  180
CAEFGSHSIE STGNELGVYN SSCAANALSL GVTTTQSSSD QKKAIVAVDN DGSKKIADTF  240
GQRTSIYRGV TRHRWTGRYE AHLWDNSCRR EGQARKGRQG GYDKEDKAAR AYDLAALKYW  300
GPTATTNFPV STYSKELEDM KHVTKQEFIA SLRRKSSGFS RGASIYRGVT RHHQQGRWQA  360
RIGRVAGNKD LYLGTFATEE EAAEAYDIAA IKFRGINAVT NFEMNRYDVE AIGKSSLPVG  420
GAAKRLKLSL EAEEQKPSVN HDQQHPQCSS GNNINFTAMQ PVHSIPCGIP YDAAAANAYY  480
HNLFHQFQPN YYGALDSAGL NPNIATQMNM MPQQPAEFYI WPNHQSH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10510.2	0.0	AP2 family protein