PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP012454.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WOX
Protein Properties Length: 216aa    MW: 24999.9 Da    PI: 4.6573
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP012454.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox66.24.3e-2198158257
                  T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
     Homeobox   2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                  r+R+t+++ ql++Le+ Fe+ n +p +++++eL+++l    +++e++V++WFqNrRa+ k+
  PCP012454.1  98 RQRWTPSPVQLQILEQIFEEgNGTPCKQKIKELTMELtqhgQISETNVYNWFQNRRARSKR 158
                  89*****************99**************************************97 PP
2Wus_type_Homeobox97.21.3e-3197159264
  Wus_type_Homeobox   2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 
                        +r+RWtP+p Q++iLe+++++G  tP k++i+++t+eL+++G+i+++NV++WFQNr+aR+++k
        PCP012454.1  97 SRQRWTPSPVQLQILEQIFEEGNGTPCKQKIKELTMELTQHGQISETNVYNWFQNRRARSKRK 159
                        789***********************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MMGEWQQQQQ QQIIHQNLQN PEEDDRIGNG NGGLFVKVMT DEQMEQLRQQ IAVYTTICDQ  60
LVDLHKQLSA QQDLTGMRLG NFYCDPFMAS GGHKITSRQR WTPSPVQLQI LEQIFEEGNG  120
TPCKQKIKEL TMELTQHGQI SETNVYNWFQ NRRARSKRKL SMTTQNNAES EAEPEVESPR  180
DEKTKPEDIL SFDNSALRAE NMYLQSPELG FGNFDW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35550.13e-66WOX family protein