PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP012520.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 241aa    MW: 26191.9 Da    PI: 5.7987
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP012520.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.48.3e-1967117155
          AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  + y+GVr +  +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a+++++g
  PCP012520.1  67 PVYRGVRKRN-WGKWVSEIREPRK---KSRIWLGTFSTPEMAARAHDVAALSIKG 117
                  68*****887.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MAPEPNISEA ESTSNSSSCS SGLLQTRPNS TANTLNTKTK KPSREQQQVV LKRKRDDDGN  60
NNSSKHPVYR GVRKRNWGKW VSEIREPRKK SRIWLGTFST PEMAARAHDV AALSIKGNSA  120
ILNFPELTEL LPRPASLKPQ DIQAAATKAA AMVHLNSTTS SSLSSSSSSS SCLLSQSEGS  180
DSEELGEIVE LPNIEGSFDS PESRNEFILV NDSLDGWVYP SLGFEGVELN LWGFFSSDGS  240
S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.14e-55ERF family protein