PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP012807.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 97aa    MW: 11258.8 Da    PI: 10.7554
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP012807.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.81.6e-125096455
                 HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                 +h e+ErrRR++ N+++  Lr ++P+ +      K++Ka+ L  A+ YI+ +q
  PCP012807.1 50 NHVEAERRRREKPNQRYYALRAVVPNiS------KMDKASLLGDAITYISRMQ 96
                 799***********************66......****************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 97 aa     Download sequence    
MNQMMVDGFN VQTRVSSSEL LKDESSAQID ERKPRKRGRK PANGREEPLN HVEAERRRRE  60
KPNQRYYALR AVVPNISKMD KASLLGDAIT YISRMQL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13240RKPRKRGRK
25560ERRRRE
35661RRRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16430.15e-38bHLH family protein