PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP012916.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB_related
Protein Properties Length: 249aa    MW: 27139.2 Da    PI: 4.3906
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP012916.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.71.3e-0844672347
                     -HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqky 47
                     +W++Ia +++ gRt++++k++w++ 
      PCP012916.1 44 RWSLIAGRLP-GRTDNEIKNYWNTT 67
                     5*********.************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MKKNSLSGSI TFSGTVTVFS LQTAPTLVFS FEMDALILLI FYYRWSLIAG RLPGRTDNEI  60
KNYWNTTLGK KSKVDSFSRS SKETSLNPSK SVAKKKDVES KTSTAAAQPI VIRTKATRLT  120
KILVPQNIPS DENSTAAAAN PLELQAHQTQ SAEKGGSTEE SPRTNAGDCS NILKNFGCDD  180
DDIDAKGDQY CNEFQLLDSI PLDEAMINDG CWTGGNGCDL EDYGASLDLD SLAFLLDSED  240
WPSQENVIV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35550.11e-13MYB family protein