PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP012919.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

MYB

Protein Properties

Length: 256aa MW: 29733.2 Da PI: 5.3148

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP012919.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.6	2.9e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT Ed++l+d+v+++G g+W++ +r+ g++R++k+c++rw++yl PCP012919.1 14 RGAWTDAEDQILLDYVREHGEGRWEKLSRETGLKRCGKSCRLRWLNYL 61 89********************************************97 PP
2	Myb_DNA-binding	55.8	1.1e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ T+eE+el+++++k+lG++ W++Ia +++ gRt++++k++w++ PCP012919.1 67 RGNITQEEEELIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNSI 111 7999****************.*****.*********975 PP

Sequence ? help Back to Top
Protein Sequence Length: 256 aa Download sequence
MGRSSRCEKD GLRRGAWTDA EDQILLDYVR EHGEGRWEKL SRETGLKRCG KSCRLRWLNY 60 LRPDIKRGNI TQEEEELIIR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNS ILRKKAKENQ 120 SERSRNERKT IEDLATEAAS SVETDSHFTK EERRPANNGI EEKNTEPEPD CHDGFLPNTS 180 DSDMPRNFIT DLNEGQLSIS EFLHTDFTKL CELNMKIVDC TNNCRNGSLM STATTEAPLH 240 LEELLNDWEA YDFYLP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22640.1	5e-59	MYB family protein