PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP012984.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 361aa MW: 41714.8 Da PI: 4.8344

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP012984.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	179.2	1.1e-55	9	138	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 +ppGfrFhPtdeelv +yL+kkv+++k++l +vi+++d+y++ePwdL++ ++e++ewyfFs++dkky+tg+r+nrat +g+Wkatg+dk+v++ PCP012984.1 9 VPPGFRFHPTDEELVGYYLRKKVASQKIDL-DVIRDIDLYRIEPWDLQErcrIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKSVYD- 104 69**************************.9***********953432233667**********************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 k +l+g++ktLvfykgrap+g+ktdW+mheyrle PCP012984.1 105 KAKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLE 138 999***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MMESIESTVP PGFRFHPTDE ELVGYYLRKK VASQKIDLDV IRDIDLYRIE PWDLQERCRI 60 GYEEQNEWYF FSHKDKKYPT GTRTNRATMA GFWKATGRDK SVYDKAKLIG MRKTLVFYKG 120 RAPNGQKTDW IMHEYRLESD ENGPPQAKRK LQKLIKENAC ICIKEEGWVV CRAFKKRISS 180 QNKSIEGWDS SYFYEELNGL TSVADPTDYM RQPQSFLSQN FMCKQETEAD SLNFLHSDPF 240 VQLPQLESPS LPLIKRPTSM SLISENNTEL EDEQSIRGCN NAEKVTDWRA LDKFVASQLS 300 QEERYEGDGE ASFGAHDESD MSLLLLQSSS ARDDDDQVEN KLNGFLNSSP DCDIGICIFE 360 K

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MMESIESTVP PGFRFHPTDE ELVGYYLRKK VASQKIDLDV IRDIDLYRIE PWDLQERCRI  60
GYEEQNEWYF FSHKDKKYPT GTRTNRATMA GFWKATGRDK SVYDKAKLIG MRKTLVFYKG  120
RAPNGQKTDW IMHEYRLESD ENGPPQAKRK LQKLIKENAC ICIKEEGWVV CRAFKKRISS  180
QNKSIEGWDS SYFYEELNGL TSVADPTDYM RQPQSFLSQN FMCKQETEAD SLNFLHSDPF  240
VQLPQLESPS LPLIKRPTSM SLISENNTEL EDEQSIRGCN NAEKVTDWRA LDKFVASQLS  300
QEERYEGDGE ASFGAHDESD MSLLLLQSSS ARDDDDQVEN KLNGFLNSSP DCDIGICIFE  360
K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G18060.1	1e-143	NAC family protein