PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP013004.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 323aa    MW: 35619.4 Da    PI: 6.9577
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP013004.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.51.5e-104897154
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                 r++ +  rE+ RRdr+N+ f+eL   l ++     +K++Ka+iL+ +++ +k+L
  PCP013004.1 48 RKVQKADREKVRRDRLNEHFFELGNTLDPD----RPKNDKATILTDTIQMLKDL 97
                 5677889********************997....79****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MDPWKSDDFS AASAPPSTHP LPSNRPHNSN SDSRQRLDAE TKDPIVARKV QKADREKVRR  60
DRLNEHFFEL GNTLDPDRPK NDKATILTDT IQMLKDLTSD VNKLKAECAA LTDESRELTQ  120
EKNELREEKA SLKSDIENLN VQYQQRLRVM LPWAGLDPSV VMAPPYSYPM PVAVPPGPIP  180
MHPSLQPYPY FHAQNPAAMP NPCSTFVPYP VPANPPVEHP SPQYASVSHS SSKQDSRSRS  240
SDHQRGSNAE RCDDSNDVAT DLELKMPGSS APQDSSSGVK KAKQSQRKDR GITDGSSSSR  300
SSSSQVVQES SSNSVGDVPK PNK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.17e-75bHLH family protein