PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP013044.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 315aa    MW: 35380.8 Da    PI: 6.5117
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP013044.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH421.7e-13117168155
                  CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +r++h  +Er+RR+++N+ ++ Lr+l+P++   ++++ + a+i   A++++k+L+
  PCP013044.1 117 QRMTHIVVERNRRKQMNEYLAVLRSLMPQS---YAQRGDQASIIGGAINFVKELE 168
                  79****************************...*******************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MALEAVISPQ EYLFGFGCKD YYSFNGGGSW GSDFSLQDRQ GIIENWDYCS SFPSLLQNVK  60
DWDPNSSPEA CTVDQSCPPG HLSAMETPPP PPPPATTNRR KRHRTKSSKN KEEIENQRMT  120
HIVVERNRRK QMNEYLAVLR SLMPQSYAQR GDQASIIGGA INFVKELEQL LQSMDSNKRS  180
KQQALAEFFT FPQFSTRATH CNQSAGLQAN ELNTTQYNNN QWAAAAADIE VTMVDSHANL  240
KILSKKRPRQ LLNIVAGFQS LRLSVLHLNV TTADEMVLYS VSVKIEEGCL LNTVDEIAAA  300
VNQMLRSINQ EVDFN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1118129RMTHIVVERNRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.11e-86bHLH family protein