PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP013075.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

MYB_related

Protein Properties

Length: 1014aa MW: 112703 Da PI: 4.6797

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP013075.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	21.6	5e-07	748	795	3	47
SS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqky 47 rW++eE++ ++++v + Wk ++ ++ R+ +++s+++++ PCP013075.1 748 RWSEEEEQTFLEVVYSNPASlgrkFWKQLSAVFP-SRSKRELISYYFNV 795 9***********8777667777******.*********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 1014 aa Download sequence
MVKICCIGAG YVGGPTMAVI ALKCPDIEVA VVDISVSRIN AWNSDTLPIY EPGLDDVVKQ 60 RRGKNLFFST DVEKHVMEAD IVFVSVNTPT KTQGLGAGKA ADLTYWESAA RMIADVSKSD 120 KIVVEKSTVP VKTAEAIEKI LTHNSKGINF QILSNPEFLA EGTAIEDLFS PDRVLIGGRE 180 TPAGQKAIQA LKSVYAHWVP EERIICSNLW SAELSKLAAN AFLAQRISSV NAISALCEAT 240 GANVQEVAHA VGKDTRIGPK FLNASVGFGG SCFQKDILNL VYICECNGLP EVANYWKQVI 300 KINDYQKSRF VNRVVSSMFN TVSGKKIAIL GFAFKKDTGD TRETPAIDVC KGLLGDKARL 360 SIYDPQVSED QIQRDLSMKK FDWDHPIHLQ PQSPTTVKQV GVVWDAYAAT KDAHGICILT 420 EWDEFKSLDY QKIYDQMQKP AFVFDGRNVV DAEKLRQIGF IVYSIGKPLD EWLKDMPAVA 480 VVSVYNWRKT GVHHHHSIPL LVNMGFKRPF DDVEFQELPY KHSRQHEFGD RRSPFSDAVS 540 CNGAPRKACV SGENRNGDSK SQWLDVLEKY SVAEVSTSVN KGCASFSSVT RSFGEEDVRS 600 GPDAYSSPTE DFKFDFPRRT CVPFKDAYSS LFDCSPRKQA PVGPDHQAII PTWSGCMNLL 660 DQKDEIKNDS EEKLLGTFVI PMPVSDLSAL ECDKVGLGRT DCSCLDAGSV RCVRKHVMEA 720 REELRRTLGN EKFVKLGFCD MGEEVARRWS EEEEQTFLEV VYSNPASLGR KFWKQLSAVF 780 PSRSKRELIS YYFNVFMLRT RGAQNRSSIL DIDSDDDEWH VNDGASNDGR IAEDDEDSVI 840 ESPYYQGDHL DHEEDYSEAD SSDDDGSDGD GDVGHVGGDS SEEDGGIDHV AQSYMLNSVN 900 EGKFDTVGNW EKNSACTGEE FDFQDDSCVS FEFQSYMHDS HSKCLDSQPD ASGVVAGHAY 960 LLEPCNAKVW DARFTVDTMK GDDLLPTWSM IEDIFDQGME DYRMTDERKA PAGG

Sequence ? help Back to Top

Protein Sequence Length: 1014 aa Download sequence

MVKICCIGAG YVGGPTMAVI ALKCPDIEVA VVDISVSRIN AWNSDTLPIY EPGLDDVVKQ  60
RRGKNLFFST DVEKHVMEAD IVFVSVNTPT KTQGLGAGKA ADLTYWESAA RMIADVSKSD  120
KIVVEKSTVP VKTAEAIEKI LTHNSKGINF QILSNPEFLA EGTAIEDLFS PDRVLIGGRE  180
TPAGQKAIQA LKSVYAHWVP EERIICSNLW SAELSKLAAN AFLAQRISSV NAISALCEAT  240
GANVQEVAHA VGKDTRIGPK FLNASVGFGG SCFQKDILNL VYICECNGLP EVANYWKQVI  300
KINDYQKSRF VNRVVSSMFN TVSGKKIAIL GFAFKKDTGD TRETPAIDVC KGLLGDKARL  360
SIYDPQVSED QIQRDLSMKK FDWDHPIHLQ PQSPTTVKQV GVVWDAYAAT KDAHGICILT  420
EWDEFKSLDY QKIYDQMQKP AFVFDGRNVV DAEKLRQIGF IVYSIGKPLD EWLKDMPAVA  480
VVSVYNWRKT GVHHHHSIPL LVNMGFKRPF DDVEFQELPY KHSRQHEFGD RRSPFSDAVS  540
CNGAPRKACV SGENRNGDSK SQWLDVLEKY SVAEVSTSVN KGCASFSSVT RSFGEEDVRS  600
GPDAYSSPTE DFKFDFPRRT CVPFKDAYSS LFDCSPRKQA PVGPDHQAII PTWSGCMNLL  660
DQKDEIKNDS EEKLLGTFVI PMPVSDLSAL ECDKVGLGRT DCSCLDAGSV RCVRKHVMEA  720
REELRRTLGN EKFVKLGFCD MGEEVARRWS EEEEQTFLEV VYSNPASLGR KFWKQLSAVF  780
PSRSKRELIS YYFNVFMLRT RGAQNRSSIL DIDSDDDEWH VNDGASNDGR IAEDDEDSVI  840
ESPYYQGDHL DHEEDYSEAD SSDDDGSDGD GDVGHVGGDS SEEDGGIDHV AQSYMLNSVN  900
EGKFDTVGNW EKNSACTGEE FDFQDDSCVS FEFQSYMHDS HSKCLDSQPD ASGVVAGHAY  960
LLEPCNAKVW DARFTVDTMK GDDLLPTWSM IEDIFDQGME DYRMTDERKA PAGG