PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP013114.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB_related
Protein Properties Length: 268aa    MW: 29565.8 Da    PI: 4.5851
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP013114.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.95.7e-141463146
                     TSSS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.....tWktIartmgkgRtlkqcksrwqk 46
                     +g+W++eEd  l+++ +++G+g      +++ a+ ++ gRt++++k++w++
      PCP013114.1 14 KGPWSPEEDTTLKNYLHKHGSGgnwiaLPTKAASQLP-GRTDNDIKNYWNT 63
                     79*********************66666666677777.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MGRAPCCDKS RVKKGPWSPE EDTTLKNYLH KHGSGGNWIA LPTKAASQLP GRTDNDIKNY  60
WNTKLKKKLL ATNNMNTVDT NLSQFSDSIP KTETLHDQGT PSCFDGTLPY LKDVSSGQSF  120
DPCTQISPSN PMEVNGFETR EDKSFSIISP SQEVSSLPTS SGLGLENNYS IWSGNEGVDN  180
VSGVLMPFGF EPPNDDLLDG FAEEGTRLGL RVLEPEDKTA SLAKFNIRFD FQCAEYSNLV  240
TPHFAEKADE MTSTNKDPKI LIDRDLDT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57620.19e-24MYB family protein