PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP013131.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB_related
Protein Properties Length: 319aa    MW: 34907.2 Da    PI: 10.332
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP013131.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.61.4e-13130174347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ +++ + ++lG+g+W+ I+r   ++Rt+ q+ s+ qky
      PCP013131.1 130 PWTEEEHRKFLIGLEKLGKGDWRGISRNYVTTRTPTQVASHAQKY 174
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MGRKCSHCGN VGHNSRTCTN FRGTPSSTSF VGFRLFGVQL HHDHHHIVMS SSNMNSNSAN  60
HHVAMSMKKS FSTDCLPTTS SASSSSPSNS SLSPSRLSMD ENICAADKAS IGYLSDGLIC  120
RAQERKKGVP WTEEEHRKFL IGLEKLGKGD WRGISRNYVT TRTPTQVASH AQKYFLRQAS  180
LTKKKRRSSL FDMFGSSNNI NMATYDPIPT QRDNIIHGDM AIDTSKLPPL QRSTAAKNLK  240
SDHNQKPQSG RTTTQQLPAW IYGLIDSQMK SSSSSSEASV VPDLELTLAA PTSPNLEQKN  300
RSSPTPAGPL LNLGRISVT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1183187KKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56840.12e-55MYB_related family protein