PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP013194.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 360aa    MW: 38986.8 Da    PI: 6.5593
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP013194.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.95e-1862111255
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  +y+GVr+++ +g+WvAeIr+p++   r+r +lg+f tae+Aa+a+++a+  l+g
  PCP013194.1  62 RYRGVRQRS-WGKWVAEIREPRK---RTRKWLGTFATAEDAARAYDRAAIILYG 111
                  59****999.**********954...5**********************98876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    
MEEDQDRDSA AEAAPAHHLP QENSNKTTKD NSTTASTATT ETTDSSNRKC KGKGGPDNKK  60
FRYRGVRQRS WGKWVAEIRE PRKRTRKWLG TFATAEDAAR AYDRAAIILY GSRVQLNLQP  120
SDSSSQNSMG GFSSSSSSSS SSTQTLRPLL PRPSGFGLTL PYPSSSHPVP LMASGFVPYG  180
VGVGLGVYPN VAAAAAVAGG GATSSVRLNQ HPHHNNMLDQ DHHSQNNINP LHQQLQQQQQ  240
VVVQQFHHQY PISLSDGSGC DTSTSNQYPN PSHDQYQLQL HHQNNNNLEC CSYDDVMNSL  300
VGSGLSTEPM AVAPGCSDIP MGGVGPISPS MWPLTSEEEC VPSLWDHGDP FFLDLKGLDS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40220.13e-32ERF family protein