PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP013252.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 347aa MW: 39116.6 Da PI: 9.4718

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP013252.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	159.5	1.3e-49	15	142	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kg 97 lppGfrFhP+deel+v+yL++k+ +++l++ + i+e+d+yk++Pw+Lp+k+ +e+ewyfFs+r++ky++g+r+nr+++ gyWka g+dk++l++ + PCP013252.1 15 LPPGFRFHPSDEELIVHYLRNKMISHPLPA-QLITEIDLYKYNPWELPSKALFGEDEWYFFSPRHRKYPNGERPNRTAAVGYWKAAGSDKPILTScGL 111 79**************************.89***********87778999****************99***********99777 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 + +g+kk Lvfy+grapkg+kt+W+m+eyrl PCP013252.1 112 KRIGVKKALVFYTGRAPKGVKTEWIMNEYRL 142 88*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MEKEPAFTTY STMQLPPGFR FHPSDEELIV HYLRNKMISH PLPAQLITEI DLYKYNPWEL 60 PSKALFGEDE WYFFSPRHRK YPNGERPNRT AAVGYWKAAG SDKPILTSCG LKRIGVKKAL 120 VFYTGRAPKG VKTEWIMNEY RLLHCTVNPS RCKGSMRLDD WVLCRVQQRG STTKNTCNAQ 180 DIYNTEFGRC LPKSGPTVRP TNPIHRADII TDFLYKDCRV LASILAGQPP SPIETSSASF 240 QGSKDSYPVG SNNKVKSTVS ISSSGINSTL KRKIREENTK EDLFPLINLE SKNKDGNVLP 300 SKKLAAGNVV NCYIPNHLQN DIPKANPTVP ANFEEFNEMA FLATYSS

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MEKEPAFTTY STMQLPPGFR FHPSDEELIV HYLRNKMISH PLPAQLITEI DLYKYNPWEL  60
PSKALFGEDE WYFFSPRHRK YPNGERPNRT AAVGYWKAAG SDKPILTSCG LKRIGVKKAL  120
VFYTGRAPKG VKTEWIMNEY RLLHCTVNPS RCKGSMRLDD WVLCRVQQRG STTKNTCNAQ  180
DIYNTEFGRC LPKSGPTVRP TNPIHRADII TDFLYKDCRV LASILAGQPP SPIETSSASF  240
QGSKDSYPVG SNNKVKSTVS ISSSGINSTL KRKIREENTK EDLFPLINLE SKNKDGNVLP  300
SKKLAAGNVV NCYIPNHLQN DIPKANPTVP ANFEEFNEMA FLATYSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61110.1	5e-74	NAC family protein