PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP013434.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 171aa    MW: 18982.1 Da    PI: 6.0323
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP013434.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM68.51.8e-213210654128
          NAM  54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                  + kew+fFs+ d ky +g+  nr+t++g+ k tgkd+e+ ++ +++++g k++L+fy+gr +k++ktdWv+hey+l
  PCP013434.1  32 HGKEWFFFSRLDYKY-NGTPCNRVTDQGFYKITGKDHEIRAEeSKAVIGKKRSLTFYEGRGSKAKKTDWVVHEYSL 106
                  578***********9.79**********************98566779**************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MGGEEGGDGE VGRGGGHGEE GFGFLAFFPE VHGKEWFFFS RLDYKYNGTP CNRVTDQGFY  60
KITGKDHEIR AEESKAVIGK KRSLTFYEGR GSKAKKTDWV VHEYSLTETE VSSKPTKQMN  120
FVLWRIKNMS ASYKKPKGDP IHGELADTGA TSEDYQAAVS DVIAEPVEQL G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.13e-22NAC family protein