PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP013437.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 371aa MW: 42060.8 Da PI: 5.26

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP013437.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	138.2	5.3e-43	24	153	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.k 96 l pGfrF Ptde lv++yL++k++g + ++ + i+e+d++k+eP dLp + +ekew+fF++ d ky++g+r nrat++g+ k tgk++e+ ++ + PCP013437.1 24 LLPGFRFYPTDELLVSYYLRNKIQGADSHFRHLIPEIDVCKYEPCDLPaFFPEVHEKEWFFFCRLDYKYNNGTRCNRATDQGFYKITGKEREIRAEeS 121 579************************9889***********545556899*********************************9856 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 +++vg k+tL+fy+gr pk++ktdWv+hey l PCP013437.1 122 KAVVGKKRTLTFYEGRVPKSKKTDWVVHEYYL 153 6779************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 371 aa Download sequence
MSSGSSSSSM TTEEGDAENV NVILLPGFRF YPTDELLVSY YLRNKIQGAD SHFRHLIPEI 60 DVCKYEPCDL PAFFPEVHEK EWFFFCRLDY KYNNGTRCNR ATDQGFYKIT GKEREIRAEE 120 SKAVVGKKRT LTFYEGRVPK SKKTDWVVHE YYLTETEVGS KPTKQKDFVL CRLNNRSASY 180 KKPKGGPIHG ELADSGANSE DDQAVVSDVI AEPVEHLGNK ELGDVNRNES PDGSCLMDCN 240 DIWTLADGDV ETGGLRFPGF DDPNRFLELC AEMRDILNSP SQLPQPHQPL QPYQPLQPHQ 300 PPQPYQPLQP HQPQDYCPTT HYSHHSHISC LNHSNLCSPS INTELGDIVH TNNYIGCNDE 360 LHVNYIAMFG N

Sequence ? help Back to Top

Protein Sequence Length: 371 aa Download sequence

MSSGSSSSSM TTEEGDAENV NVILLPGFRF YPTDELLVSY YLRNKIQGAD SHFRHLIPEI  60
DVCKYEPCDL PAFFPEVHEK EWFFFCRLDY KYNNGTRCNR ATDQGFYKIT GKEREIRAEE  120
SKAVVGKKRT LTFYEGRVPK SKKTDWVVHE YYLTETEVGS KPTKQKDFVL CRLNNRSASY  180
KKPKGGPIHG ELADSGANSE DDQAVVSDVI AEPVEHLGNK ELGDVNRNES PDGSCLMDCN  240
DIWTLADGDV ETGGLRFPGF DDPNRFLELC AEMRDILNSP SQLPQPHQPL QPYQPLQPHQ  300
PPQPYQPLQP HQPQDYCPTT HYSHHSHISC LNHSNLCSPS INTELGDIVH TNNYIGCNDE  360
LHVNYIAMFG N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35580.1	1e-45	NAC family protein