PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP013570.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NF-YB
Protein Properties Length: 165aa    MW: 18596.6 Da    PI: 6.88
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP013570.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB173.42.3e-5442137297
        NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 
                  +e dr+lPianv+rimk+ lP nakisk+aket+qecvsefisfvt+easdkc++ekrkt+ngdd++walatlGf+dy+eplk yl++yrelegek
  PCP013570.1  42 KEPDRLLPIANVGRIMKQNLPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICWALATLGFDDYAEPLKRYLHRYRELEGEK 137
                  789*******************************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    
MVDNIGNNNS SDREGFKYNF TGGGSVSSDY HHHLHHQEGV IKEPDRLLPI ANVGRIMKQN  60
LPPNAKISKE AKETMQECVS EFISFVTGEA SDKCHKEKRK TVNGDDICWA LATLGFDDYA  120
EPLKRYLHRY RELEGEKAAN QGKANSNEEQ TATKDKISYS SSKYL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47810.18e-63NF-YB family protein