PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP013689.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 183aa    MW: 19985.8 Da    PI: 8.0542
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP013689.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP243.57.7e-142070256
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
                 ++kGVr +  +grWv+eIr p+    +  +++ g+++  ++Aa+a++aa  +++g+
  PCP013689.1 20 RHKGVRMRA-WGRWVSEIRLPK----SgIKIWFGTYDALDQAARAYDAAVYCIHGA 70
                 58****998.**********94....3599***********************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
MDMGRTSTLK KVPRQRAPGR HKGVRMRAWG RWVSEIRLPK SGIKIWFGTY DALDQAARAY  60
DAAVYCIHGA SAEFNFPENK RPVPPTSSAV HVKMKDIQAI ATYFSSADVS VSTLVSSTMI  120
TQVPSDKPAS PNLLISTGMA TDYEVDCGSF APSCATGAAV TSPENLQLDD FLMLDTGWIA  180
EFY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31060.18e-35ERF family protein