PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP013805.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 201aa    MW: 22334 Da    PI: 5.1022
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP013805.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2561e-171463255
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 +y+GVr +k +g+Wv+eIr+p   gk++r++lg++  +e+Aa+a++aa++ l+g
  PCP013805.1 14 RYRGVRKRK-WGKWVSEIREP---GKKTRIWLGSYEAPEMAAAAYDAAALHLKG 63
                 69****999.**********8...557***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MESQAADCRV SPARYRGVRK RKWGKWVSEI REPGKKTRIW LGSYEAPEMA AAAYDAAALH  60
LKGRGAALNF PEMADSLPRP ASSSAMDVQL AAQEAALRVR RQQLPMEAFP TEEAGDSSRG  120
LSSAPVTVGL SPSQIQAINE SPLDSPKMWM QYMCRAHCHE APSSLGGDLW DIDNSSPNKY  180
YEGDVESMDY EDMQHWSIWD P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33760.15e-50ERF family protein