PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP013898.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ZF-HD
Protein Properties Length: 273aa    MW: 29635.9 Da    PI: 7.3822
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP013898.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer103.81.1e-3264119359
  ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 
                   vrY+eClkNhA+s+Ggha+DGCgEf+++ g+egt++alkCaAC+CHRnFHR+e+e 
  PCP013898.1  64 MVRYRECLKNHAVSIGGHALDGCGEFLSA-GDEGTIDALKCAACNCHRNFHRKESEG 119
                  79**************************9.999*********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MEFDEHEEQD EEMEMQAAPP GYASVAESSR PKMGPAGEET VSSSRKRGTA AAPNSTTTTT  60
LATMVRYREC LKNHAVSIGG HALDGCGEFL SAGDEGTIDA LKCAACNCHR NFHRKESEGE  120
LIHHHQGAGG SHQLHHHHHQ HQFSSGYCRP PPPPSGYLIT SPHARPTLAL PAASIRGGGG  180
SHSREEGEDV SNPSSSGGGG GGGFGMSKKR HRTKFTQEQK EKMLEFAEKV GWRIQKHDEA  240
AIEEFCGETG VKRHVLKVWM HNNKHTLGKK LVP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.17e-62ZF-HD family protein