PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP013917.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family Dof
Protein Properties Length: 163aa    MW: 18276.8 Da    PI: 9.5987
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP013917.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof121.33.4e-3844102260
       zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 
                  ++++++cprC+s++tkfCy+nny+++qPr+fCk+C+ryWt+GGalrnvPvG+grrk k 
  PCP013917.1  44 PDRIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKP 102
                  67899***************************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    
MAQVQTGQDV HGIKLFGKTI TLQNRSSQVK EEPKKDEQTV EKRPDRIIPC PRCKSMETKF  60
CYFNNYNVNQ PRHFCKGCQR YWTAGGALRN VPVGAGRRKT KPPCRGLAGL PEGCIYESSD  120
VVHQFELDGV VEEWHVAAAQ GSFHQVFPVV KRRRSGSGGQ PCS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29160.12e-60Dof family protein