PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP013921.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 230aa    MW: 24627.4 Da    PI: 10.0708
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP013921.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.11.1e-182574255
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 +y+GVr ++ +gr++AeIrdp   gk++r++lg+f+ta +Aa+a+++a+++++g
  PCP013921.1 25 RYRGVRKRP-WGRYAAEIRDP---GKKTRVWLGTFDTAVDAARAYDKAAREFRG 74
                 59*******.**********8...557************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MAPTTAKSLS KTGSEDPNPT SNEIRYRGVR KRPWGRYAAE IRDPGKKTRV WLGTFDTAVD  60
AARAYDKAAR EFRGGKAKTN FPTPSELQLD AVNIVNMNNA AKSAAATNVS NSPSSQSSTV  120
ESSSPPPPPP LDLALKSPRF STGGGYFTAA SGFRPLPVPR PVFFFDAFAQ ADGAAAFQLA  180
RETCRFDRPA PISGSAHTDY SASSVVDFER SSRNARLDLD LNLPAPSEVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15210.17e-28ERF family protein