PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP013948.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 339aa    MW: 37895.5 Da    PI: 8.9493
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP013948.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM167.44.8e-52141391128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 
                  lppGfrF Ptdeel+v+yL++kv+g +++l ++i+e+d+yk++Pw Lp+k+  +ekewyfFs+rd+ky++g+r+nr++ sgyWkatg+dk +++ +g+
  PCP013948.1  14 LPPGFRFYPTDEELLVQYLCRKVAGYQFNL-QIIAEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVITT-EGR 109
                  79****************************.89***************7777799*************************************99.999 PP

          NAM  99 lvglkktLvfykgrapkgektdWvmheyrl 128
                  +vg+kk Lvfy g+apkg+kt+W+mheyrl
  PCP013948.1 110 KVGIKKALVFYVGKAPKGTKTNWIMHEYRL 139
                  ****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MGVPETDPLS QLSLPPGFRF YPTDEELLVQ YLCRKVAGYQ FNLQIIAEID LYKFDPWVLP  60
SKAIFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT DKVITTEGRK VGIKKALVFY  120
VGKAPKGTKT NWIMHEYRLI EPSRKNGSSK LDEWVLCRIY KKSSGSAAAA AAAAQKPVTS  180
VSSKEHSNGS SSSCSSQLDD VLEWLPDIDD QNFTLPRINS LKTLLQQQED SKINFQNTGS  240
GNFDWATLAG LNPAPELNLN NQTQQGQGQM NLNFNNNDVS PFNPASLPRG MAAGEVGKTA  300
EEEVQSGLRT QRVDNSNFFQ QRSQNIYYPV RPSGFGLWQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.21e-130NAC family protein