PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP013950.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 375aa MW: 41933.9 Da PI: 8.5804

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP013950.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	172.9	9.4e-54	36	163	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kg 97 lppGfrFhPtdeelvv+yLkkk+++ +l++ +i+evd+yk++Pw+Lp+k++ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk+vl++ ++ PCP013950.1 36 LPPGFRFHPTDEELVVHYLKKKATSAPLPV-AIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTSgGT 132 79**************************.88***********988899***********************************99777 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 ++vg+kk Lvfy g+ pkg kt+W+mheyrl PCP013950.1 133 QKVGVKKALVFYGGKPPKGIKTNWIMHEYRL 163 88*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 375 aa Download sequence
MESTDSSAGS QQQQQQQPQP QQQQPQPQPP PPQPNLPPGF RFHPTDEELV VHYLKKKATS 60 APLPVAIIAE VDLYKFDPWE LPAKATFGEQ EWYFFSPRDR KYPNGARPNR AATSGYWKAT 120 GTDKPVLTSG GTQKVGVKKA LVFYGGKPPK GIKTNWIMHE YRLADNKPNN KPPGCDLGNK 180 KNSLRLDDWV LCRIYKKNNT HRPMDHERED SMEDIMGPLM PPSISHVGHH QNMKLHFPKS 240 NSSYGPPFME NDQIFFDGIM SSTDGSASTH QLQLKRPIVP SLYWNNQEDD QTAADPSSSK 300 RIQLHQLDNG TNSYGDGING GSTNNNSTSI ANLLSQLPRT PPLHQHAVLG SLGDGIFRTP 360 YQLPGMNWYS ESNLG

Sequence ? help Back to Top

Protein Sequence Length: 375 aa Download sequence

MESTDSSAGS QQQQQQQPQP QQQQPQPQPP PPQPNLPPGF RFHPTDEELV VHYLKKKATS  60
APLPVAIIAE VDLYKFDPWE LPAKATFGEQ EWYFFSPRDR KYPNGARPNR AATSGYWKAT  120
GTDKPVLTSG GTQKVGVKKA LVFYGGKPPK GIKTNWIMHE YRLADNKPNN KPPGCDLGNK  180
KNSLRLDDWV LCRIYKKNNT HRPMDHERED SMEDIMGPLM PPSISHVGHH QNMKLHFPKS  240
NSSYGPPFME NDQIFFDGIM SSTDGSASTH QLQLKRPIVP SLYWNNQEDD QTAADPSSSK  300
RIQLHQLDNG TNSYGDGING GSTNNNSTSI ANLLSQLPRT PPLHQHAVLG SLGDGIFRTP  360
YQLPGMNWYS ESNLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15510.1	1e-124	NAC family protein