PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP014137.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB
Protein Properties Length: 287aa    MW: 32255.3 Da    PI: 8.2941
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP014137.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding46.77.6e-151461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+W+  Ed ll ++++ +G g+W++ +++ g+ R++k+c++rw +yl
      PCP014137.1 14 RGPWSNREDTLLTQYIEAHGEGQWRSLPEKAGLLRCGKSCRLRWMNYL 61
                     89******************************99************97 PP
2Myb_DNA-binding52.31.3e-1667111147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg+ T eEd+l+++++ +lG++ W++Ia +++ gRt++++k++w++ 
      PCP014137.1  67 RGNITSEEDDLIIRLHSLLGNR-WSLIAGRLP-GRTDNEIKNYWNTN 111
                      7999******************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MGRAPCCSKV GLNRGPWSNR EDTLLTQYIE AHGEGQWRSL PEKAGLLRCG KSCRLRWMNY  60
LKPDIKRGNI TSEEDDLIIR LHSLLGNRWS LIAGRLPGRT DNEIKNYWNT NLSKRLISEG  120
TDPNTHKKLS EPIAKENKRR ENQSCKNRNN KKEMVKVMMK SKMKPGQHVE PQKPKVHLPK  180
PTRITSFLSL PRNDSSTSST TVTPASSIQD LNGGEGGAFG VNPWCNNGVV PCVGDPDQDP  240
INSSADGGDD HTLENLYEEY LQALLTDHHH DHQNQLELDS FADSLLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22640.12e-68MYB family protein