PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP014138.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 386aa    MW: 43012.3 Da    PI: 4.5507
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP014138.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.92.9e-19113162255
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  +y+G+r+++ +g+W+AeIrdp++     r++lg+f taeeAa+a++a +++++g
  PCP014138.1 113 QYRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDAEARRIRG 162
                  69*******.**********954...4************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    
MCGGAIISDF IAPVRSRRLT ADYLWPDLKK PSSGKRLSKP LRSEIVDLDD DFEADFQEFK  60
DESDVDEDDE MVDSKRSAFS AGKPSSARGS SAVKSVEFNG QAEKSAKRKR KNQYRGIRQR  120
PWGKWAAEIR DPRKGVRVWL GTFNTAEEAA RAYDAEARRI RGKKAKVNFP EETPRASAKR  180
SIKENPQKLI AKTNLNGTQS NLNQNFNFVN DSSEDYYNAL SFLDEKPTMN NFGYMSTFPA  240
NEDVALKSSV PSENAPFYFS SDQGSNSFDC SDFGWGEQGS KTPEISSVLS SVMEESDNSL  300
FLEDSNPTKK MKPNSQDLVP PEDNSGKTLS DELSAFEMKY FQTPYLDGSW DSSVDAFLNG  360
DATQDGGNPV DLWSFDDLSA IVGEAF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53910.13e-92ERF family protein