PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP014194.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

AP2

Protein Properties

Length: 486aa MW: 53618.9 Da PI: 7.0848

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP014194.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	35.4	2.7e-11	194	250	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d + ++ ++ k + g ++ +e Aa+a++ a++k++g PCP014194.1 194 SQYRGVTRHRWTGRYEAHLWDnSC-RKegQTrKGRQ-GGYDKEERAARAYDLAALKYWG 250 78*****************433.44555535555.779999************98 PP
2	AP2	47.9	3.3e-15	293	344	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g PCP014194.1 293 SVYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 344 78**************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 486 aa Download sequence
MGATSETAAA PNEEGPKLED FLGSCYSSSP PPTDETKAYN FHTQQDQNQD SPISQINVNE 60 SPNFTTTTPS NGEIEPSRDH FINNQPYTHY CNTLNPAQSL VPSNVMYKSW LGQTLPFCDE 120 KSLCGGDHQS ALSLTMCPSL QNGNNNNNNN NNNMGVISHQ QIQIVDNKKR AVGKSPAREP 180 VPRKSLDTFG QRTSQYRGVT RHRWTGRYEA HLWDNSCRKE GQTRKGRQGG YDKEERAARA 240 YDLAALKYWG STTHINFPLS TYEKELEEMK NMTRQEFVAN LRRKSSGFSR GASVYRGVTR 300 HHQHGRWQAR IGRVAGNKDL YLGTFSTQEE AAEAYDIAAI KFRGISAVTN FDMSRYDVKR 360 ICSSSTLIAS DLAKRSPKDS APPAAAIEDF NSCASSTSPH PLLAITSGVE PSDDLADMMW 420 NNAAEDHSNT NAPLGASSPK SHEFGIGGGD YSHAYFSAGN NGGTDHSRLG NLGLVQQVPM 480 FALWND

Sequence ? help Back to Top

Protein Sequence Length: 486 aa Download sequence

MGATSETAAA PNEEGPKLED FLGSCYSSSP PPTDETKAYN FHTQQDQNQD SPISQINVNE  60
SPNFTTTTPS NGEIEPSRDH FINNQPYTHY CNTLNPAQSL VPSNVMYKSW LGQTLPFCDE  120
KSLCGGDHQS ALSLTMCPSL QNGNNNNNNN NNNMGVISHQ QIQIVDNKKR AVGKSPAREP  180
VPRKSLDTFG QRTSQYRGVT RHRWTGRYEA HLWDNSCRKE GQTRKGRQGG YDKEERAARA  240
YDLAALKYWG STTHINFPLS TYEKELEEMK NMTRQEFVAN LRRKSSGFSR GASVYRGVTR  300
HHQHGRWQAR IGRVAGNKDL YLGTFSTQEE AAEAYDIAAI KFRGISAVTN FDMSRYDVKR  360
ICSSSTLIAS DLAKRSPKDS APPAAAIEDF NSCASSTSPH PLLAITSGVE PSDDLADMMW  420
NNAAEDHSNT NAPLGASSPK SHEFGIGGGD YSHAYFSAGN NGGTDHSRLG NLGLVQQVPM  480
FALWND

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72570.1	1e-125	AP2 family protein